Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| [lsu ribosomal protein l3p]-glutamine n5-methyltransferase | SAMN04490193_4153 | Not Available | Negative | 4393126 - 4394034 | 34238.4 |
| nicotinamidase-related amidase | SAMN04490193_4154 | Not Available | Positive | 4394275 - 4394865 | 20696.1 |
| hypothetical protein | SAMN04490193_4155 | Not Available | Positive | 4395007 - 4395327 | 11369.3 |
| dna-nicking endonuclease, smr domain | SAMN04490193_4156 | Not Available | Positive | 4395403 - 4395960 | 20820.1 |
| hypothetical protein | SAMN04490193_4157 | Not Available | Negative | 4396013 - 4396201 | 6953.28 |
| gtp cyclohydrolase i | SAMN04490193_4159 | Not Available | Positive | 4396999 - 4397544 | 20117.7 |
| glutaredoxin | SAMN04490193_4160 | Not Available | Positive | 4397646 - 4398017 | 14030.2 |
| hypothetical protein | SAMN04490193_4161 | Not Available | Negative | 4398064 - 4398390 | 11778.2 |
| protein of unknown function | SAMN04490193_4162 | Not Available | Negative | 4398387 - 4399712 | 47156.4 |
| citrate-mg2+:h+ or citrate-ca2+:h+ symporter, citmhs family | SAMN04490193_4163 | Not Available | Negative | 4399714 - 4401006 | 45608.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





