Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-terminal novel e3 ligase, lrr-interacting | SAMN04490193_4133 | Not Available | Negative | 4369250 - 4374070 | 179999.0 |
| asparagine synthase (glutamine-hydrolysing) | SAMN04490193_4134 | Not Available | Positive | 4374381 - 4376153 | 65579.3 |
| gnat-family acetyltransferase tigr03103 | SAMN04490193_4135 | Not Available | Positive | 4376157 - 4377893 | 63394.5 |
| hydrolase, peptidase m42 family | SAMN04490193_4136 | Not Available | Positive | 4378004 - 4379188 | 42560.2 |
| hypothetical protein | SAMN04490193_4137 | Not Available | Positive | 4379248 - 4379475 | 8584.24 |
| carbon storage regulator, csra | SAMN04490193_4138 | Not Available | Negative | 4379477 - 4379674 | 7086.73 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04490193_4139 | Not Available | Negative | 4379802 - 4380617 | 29429.8 |
| protein of unknown function | SAMN04490193_4140 | Not Available | Positive | 4380946 - 4381098 | 5345.19 |
| phosphoglycerol transferase mdob | SAMN04490193_4141 | Not Available | Negative | 4381168 - 4383255 | 77316.6 |
| phospholipase_d-nuclease n-terminal | SAMN04490193_4142 | Not Available | Negative | 4383602 - 4383793 | 6681.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





