Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_4112 | Not Available | Negative | 4346913 - 4347566 | 24034.8 |
| immunity protein imm2 | SAMN04490193_4114 | Not Available | Negative | 4348675 - 4349028 | 13394.1 |
| cobq/cobb/mind/para nucleotide binding domain-containing protein | SAMN04490193_4115 | Not Available | Negative | 4349028 - 4349948 | 32863.3 |
| Trna-asn | Not Available | Not Available | Positive | 4350070 - 4350145 | Not Available |
| hypothetical protein | SAMN04490193_4117 | Not Available | Positive | 4350146 - 4350193 | 1865.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_4118 | Not Available | Negative | 4350206 - 4351102 | 32699.8 |
| l-lactate dehydrogenase (cytochrome) | SAMN04490193_4119 | Not Available | Positive | 4351203 - 4352345 | 41272.7 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_4120 | Not Available | Positive | 4352629 - 4353555 | 34729.8 |
| pyrroloquinoline quinone (pqq) biosynthesis protein c | SAMN04490193_4121 | Not Available | Negative | 4353577 - 4354380 | 30681.6 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_4122 | Not Available | Negative | 4354426 - 4356888 | 90839.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





