Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04490193_4100 | Not Available | Negative | 4334595 - 4335503 | 33857.9 |
| glycosyltransferase, gt2 family | SAMN04490193_4101 | Not Available | Negative | 4335457 - 4336368 | 33973.4 |
| hypothetical protein | SAMN04490193_4102 | Not Available | Negative | 4336346 - 4337452 | 40611.8 |
| udp-n-acetylglucosamine 2-epimerase | SAMN04490193_4103 | Not Available | Negative | 4337449 - 4338552 | 40190.9 |
| ala-trna(pro) deacylase | SAMN04490193_4104 | Not Available | Negative | 4338958 - 4339437 | 16986.9 |
| hypothetical protein | SAMN04490193_4105 | Not Available | Negative | 4339454 - 4340212 | 26647.8 |
| taurine catabolism dioxygenase taud, tfda family | SAMN04490193_4106 | Not Available | Negative | 4340217 - 4341302 | 40236.5 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_4107 | Not Available | Positive | 4341412 - 4342344 | 34136.1 |
| mfs transporter, dha1 family, arabinose polymer transporter | SAMN04490193_4108 | Not Available | Negative | 4342642 - 4343808 | 39683.2 |
| Trna-pseudo | Not Available | Not Available | Positive | 4345207 - 4345274 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





