Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rep element-mobilizing transposase rayt | SAMN04490193_4048 | Not Available | Negative | 4280573 - 4281031 | 18083.9 |
| hypothetical protein | SAMN04490193_4049 | Not Available | Negative | 4281309 - 4282226 | 34167.6 |
| 6-phosphogluconolactonase | SAMN04490193_4050 | Not Available | Positive | 4282308 - 4283465 | 40839.1 |
| methyl-accepting chemotaxis protein | SAMN04490193_4051 | Not Available | Negative | 4283709 - 4285766 | 73262.1 |
| trna (adenine22-n1)-methyltransferase | SAMN04490193_4052 | Not Available | Negative | 4286078 - 4286773 | 25744.1 |
| dna-binding transcriptional regulator, fadr family | SAMN04490193_4053 | Not Available | Negative | 4286787 - 4287497 | 25858.0 |
| sugar phosphate permease | SAMN04490193_4054 | Not Available | Positive | 4287924 - 4289285 | 49089.4 |
| d-glucarate dehydratase | SAMN04490193_4055 | Not Available | Positive | 4289305 - 4290630 | 48439.7 |
| probable addiction module antidote protein | SAMN04490193_4056 | Not Available | Negative | 4290817 - 4291206 | 13890.9 |
| putative addiction module killer protein | SAMN04490193_4057 | Not Available | Negative | 4291208 - 4291510 | 11268.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





