Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine/homoserine lactone efflux protein | SAMN04490193_4038 | Not Available | Negative | 4272314 - 4272922 | 21658.0 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_4039 | Not Available | Positive | 4273035 - 4273898 | 31194.6 |
| hypothetical protein | SAMN04490193_4040 | Not Available | Positive | 4273940 - 4274311 | 13975.5 |
| hypothetical protein | SAMN04490193_4041 | Not Available | Positive | 4274390 - 4274821 | 14732.4 |
| hypothetical protein | SAMN04490193_4042 | Not Available | Positive | 4274824 - 4275243 | 14966.1 |
| hypothetical protein | SAMN04490193_4043 | Not Available | Negative | 4275282 - 4276004 | 25552.9 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN04490193_4044 | Not Available | Positive | 4276147 - 4276527 | 14038.7 |
| hypothetical protein | SAMN04490193_4045 | Not Available | Positive | 4276690 - 4277946 | 45462.1 |
| glutathione s-transferase | SAMN04490193_4046 | Not Available | Positive | 4278046 - 4278672 | 23088.7 |
| uncharacterized membrane protein, oligopeptide transporter (opt) family | SAMN04490193_4047 | Not Available | Negative | 4278702 - 4280441 | 60656.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





