Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN04490193_3988 | Not Available | Negative | 4221368 - 4222288 | 33384.2 |
| phosphoribosylanthranilate isomerase | SAMN04490193_3989 | Not Available | Negative | 4222532 - 4223164 | 22198.7 |
| trna pseudouridine38-40 synthase | SAMN04490193_3990 | Not Available | Negative | 4223229 - 4224083 | 31861.4 |
| pilus assembly protein fimv | SAMN04490193_3991 | Not Available | Negative | 4224194 - 4226755 | 90102.4 |
| aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | SAMN04490193_3992 | Not Available | Negative | 4226919 - 4227929 | 35309.5 |
| aspartate semialdehyde dehydrogenase | SAMN04490193_3993 | Not Available | Negative | 4228180 - 4229292 | 40572.2 |
| 3-isopropylmalate dehydrogenase | SAMN04490193_3994 | Not Available | Negative | 4229357 - 4230439 | 38777.8 |
| methyltransferase domain-containing protein | SAMN04490193_3995 | Not Available | Negative | 4230492 - 4231256 | 27994.1 |
| 3-isopropylmalate dehydratase, small subunit | SAMN04490193_3996 | Not Available | Negative | 4231304 - 4231948 | 24324.6 |
| 3-isopropylmalate dehydratase, large subunit | SAMN04490193_3997 | Not Available | Negative | 4231959 - 4233377 | 50658.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





