Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN04490193_3885 | Not Available | Negative | 4128240 - 4129346 | 39259.5 |
| predicted small integral membrane protein | SAMN04490193_3886 | Not Available | Negative | 4129383 - 4129883 | 18079.6 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04490193_3887 | Not Available | Negative | 4130107 - 4130529 | 14895.9 |
| monoamine oxidase | SAMN04490193_3888 | Not Available | Negative | 4130541 - 4132124 | 57545.9 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04490193_3889 | Not Available | Negative | 4132137 - 4133060 | 32643.8 |
| amino acid abc transporter atp-binding protein, paat family | SAMN04490193_3890 | Not Available | Negative | 4133079 - 4133852 | 28352.4 |
| amino acid abc transporter membrane protein, paat family | SAMN04490193_3891 | Not Available | Negative | 4133845 - 4134810 | 35419.9 |
| iron complex outermembrane recepter protein | SAMN04490193_3892 | Not Available | Negative | 4134826 - 4137219 | 85668.6 |
| type ii secretion system protein d (gspd) | SAMN04490193_3893 | Not Available | Negative | 4137808 - 4140030 | 79123.5 |
| general secretion pathway protein n | SAMN04490193_3894 | Not Available | Negative | 4140027 - 4140551 | 18390.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





