Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase (nad+) | SAMN04490193_3865 | Not Available | Positive | 4106132 - 4107595 | 51181.2 |
| type vi secretion system secreted protein hcp | SAMN04490193_3866 | Not Available | Negative | 4107804 - 4108292 | 17453.8 |
| hypothetical protein | SAMN04490193_3867 | Not Available | Positive | 4108480 - 4109394 | 32745.8 |
| hypothetical protein | SAMN04490193_3868 | Not Available | Positive | 4109391 - 4109897 | 19317.3 |
| type vi secretion system secreted protein hcp | SAMN04490193_3869 | Not Available | Negative | 4110315 - 4110803 | 17301.5 |
| hypothetical protein | SAMN04490193_3870 | Not Available | Positive | 4110991 - 4111905 | 33293.4 |
| hypothetical protein | SAMN04490193_3871 | Not Available | Positive | 4111902 - 4112387 | 18405.0 |
| fmn-dependent oxidoreductase, nitrilotriacetate monooxygenase family | SAMN04490193_3872 | Not Available | Negative | 4112391 - 4113725 | 48895.1 |
| methyltransferase domain-containing protein | SAMN04490193_3873 | Not Available | Positive | 4114041 - 4114769 | 27282.1 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase | SAMN04490193_3874 | Not Available | Negative | 4114805 - 4115908 | 39090.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





