Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate aminotransferase apoenzyme | SAMN04490193_3844 | Not Available | Negative | 4082496 - 4083788 | 46098.8 |
| glyoxylate/hydroxypyruvate reductase a | SAMN04490193_3845 | Not Available | Positive | 4083983 - 4085158 | 42999.9 |
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN04490193_3847 | Not Available | Negative | 4085589 - 4086653 | 39343.1 |
| succinate semialdehyde dehydrogenase | SAMN04490193_3848 | Not Available | Negative | 4086674 - 4088134 | 51946.8 |
| acetylornithine deacetylase | SAMN04490193_3849 | Not Available | Negative | 4088252 - 4089409 | 41753.2 |
| sarcosine oxidase subunit beta | SAMN04490193_3850 | Not Available | Negative | 4089406 - 4090560 | 41823.2 |
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | SAMN04490193_3851 | Not Available | Negative | 4090557 - 4091936 | 48700.8 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN04490193_3852 | Not Available | Negative | 4091918 - 4092226 | 11124.2 |
| peptide/nickel transport system atp-binding protein | SAMN04490193_3853 | Not Available | Negative | 4092223 - 4094064 | 65499.7 |
| peptide/nickel transport system permease protein | SAMN04490193_3854 | Not Available | Negative | 4094066 - 4094941 | 30746.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





