Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | SAMN04490193_3758 | Not Available | Negative | 3993044 - 3994564 | 55170.1 |
| alcohol dehydrogenase (cytochrome c) | SAMN04490193_3759 | Not Available | Negative | 3994686 - 3996461 | 64463.5 |
| quinoprotein relay system zinc metallohydrolase 1 | SAMN04490193_3760 | Not Available | Negative | 3996588 - 3997520 | 34057.1 |
| sulfur-oxidizing protein soxy | SAMN04490193_3761 | Not Available | Negative | 3997537 - 3998286 | 27365.9 |
| abc-type amino acid transport substrate-binding protein | SAMN04490193_3762 | Not Available | Negative | 3998296 - 3999171 | 32708.8 |
| cytochrome c-550 pedf | SAMN04490193_3763 | Not Available | Negative | 3999175 - 3999636 | 16398.3 |
| alcohol dehydrogenase (cytochrome c) | SAMN04490193_3764 | Not Available | Positive | 3999892 - 4001784 | 69085.0 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN04490193_3765 | Not Available | Positive | 4002012 - 4002659 | 23254.4 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04490193_3766 | Not Available | Negative | 4002703 - 4003329 | 22839.0 |
| two-component system, narl family, sensor histidine kinase uhpb | SAMN04490193_3767 | Not Available | Negative | 4003326 - 4004597 | 46910.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





