Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate oxidase b, catalytic subunit /dihydrouracil dehydrogenase (nad+) /dihydropyrimidine dehydrogenase (nadp+) | SAMN04490193_3738 | Not Available | Positive | 3972398 - 3973672 | 46018.2 |
| transcriptional regulator, tetr family | SAMN04490193_3739 | Not Available | Negative | 3973732 - 3974352 | 23680.4 |
| hypothetical protein | SAMN04490193_3740 | Not Available | Positive | 3974468 - 3974833 | 12575.0 |
| putative copper resistance protein d | SAMN04490193_3741 | Not Available | Positive | 3974837 - 3975694 | 30910.0 |
| outer membrane porin, oprd family | SAMN04490193_3742 | Not Available | Positive | 3975886 - 3977136 | 45774.6 |
| uronate dehydrogenase | SAMN04490193_3743 | Not Available | Positive | 3977359 - 3978177 | 30193.5 |
| sugar lactone lactonase yvre | SAMN04490193_3744 | Not Available | Positive | 3978208 - 3979083 | 31573.2 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN04490193_3745 | Not Available | Positive | 3979135 - 3980097 | 34899.1 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN04490193_3746 | Not Available | Positive | 3980164 - 3980691 | 19260.4 |
| trap transporter, dctm subunit | SAMN04490193_3747 | Not Available | Positive | 3980693 - 3981973 | 45227.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





