Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux pump subunit acrb | SAMN04490193_3727 | Not Available | Positive | 3958503 - 3961724 | 113964.0 |
| rnd family efflux transporter, mfp subunit | SAMN04490193_3728 | Not Available | Positive | 3961714 - 3962883 | 41702.2 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04490193_3729 | Not Available | Positive | 3962867 - 3964285 | 51132.2 |
| hypothetical protein | SAMN04490193_3730 | Not Available | Negative | 3964383 - 3964835 | 16304.3 |
| toxin 44 | SAMN04490193_3731 | Not Available | Negative | 3964813 - 3965196 | 14367.8 |
| rep element-mobilizing transposase rayt | SAMN04490193_3732 | Not Available | Positive | 3965566 - 3966024 | 17729.6 |
| n-carbamoyl-l-amino-acid hydrolase | SAMN04490193_3734 | Not Available | Negative | 3966147 - 3967430 | 45004.1 |
| nucleobase:cation symporter-1, ncs1 family | SAMN04490193_3735 | Not Available | Negative | 3967456 - 3968937 | 53255.9 |
| dihydropyrimidinase | SAMN04490193_3736 | Not Available | Positive | 3969529 - 3970968 | 52484.1 |
| glutamate synthase (nadph/nadh) small chain | SAMN04490193_3737 | Not Available | Positive | 3971031 - 3972398 | 49246.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





