Pseudomonas marginalis strain BS2952

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas marginalis strain BS2952 is a Gram-negative, rod-shaped bacterium that thrives in aerobic conditions. It is particularly adapted to habitats characterized by metal-contaminated soil, showcasing its potential role in bioremediation processes. This strain exhibits psychrotolerant properties, with an optimal growth temperature of 16°C, allowing it to survive in cooler environments. The organism possesses a single replicon, which may influence its genomic stability and adaptability. Pseudomonas marginalis strain BS2952 has been associated with the plant host Brassica oleracea var. italica, commonly known as broccoli. This relationship suggests potential interactions that could be beneficial for both the bacterium and the plant, possibly in terms of nutrient cycling or plant health. Given its habitat and host associations, Pseudomonas marginalis strain BS2952 may play a significant role in the ecological dynamics of metal-contaminated soils, potentially aiding in the detoxification of pollutants through its metabolic processes. Its psychrotolerant nature further implies that it could be an important player in ecosystems subject to climate variations, particularly in cooler regions where metal contamination is a concern. This strain exemplifies the complex interactions between microbes and their environments, highlighting its importance in both ecological and biotechnological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas marginalis
Strainstrain BS2952

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas marginalis strain BS2952
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
Habitatmetal contaminated soil
Biotic relationshipNot Available
Host(s)Brassica oleracea var. italica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas marginalis strain BS2952 genome assembly, contig:

Gene Summary

Adenine Count

1426364 bp

Thymine Count

1441537 bp

Guanine Count

2205788 bp

Cytosine Count

2197626 bp

Genome Length

7271315 bp

Protein-coding Genes

6396 genes

Non-Coding Genes

251 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sos-response transcriptional repressor lexa (reca-mediated autopeptidase)SAMN04490193_3686Not AvailableNegative3919639 - 392027423369.2
protein of unknown functionSAMN04490193_3687Not AvailablePositive3920406 - 392075612559.6
murein tripeptide amidase mpaaSAMN04490193_3689Not AvailablePositive3921220 - 392237143425.0
cytochrome b561SAMN04490193_3690Not AvailableNegative3922390 - 392292919565.0
catalaseSAMN04490193_3691Not AvailableNegative3922926 - 392400838263.3
rna polymerase sigma-70 factor, ecf subfamilySAMN04490193_3692Not AvailablePositive3924178 - 392468419353.3
transmembrane transcriptional regulator (anti-sigma factor rsiw)SAMN04490193_3693Not AvailablePositive3924681 - 392541826928.9
cell division protein zapeSAMN04490193_3694Not AvailablePositive3925481 - 392657541056.6
leucine rich repeat-containing proteinSAMN04490193_3695Not AvailablePositive3926615 - 392791947001.1
dna-binding regulatory protein, yebc/pmpr familySAMN04490193_3696Not AvailableNegative3928144 - 392885125253.8

Displaying genes 3611 – 3620 of 6647 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ChlorosisCausesPMC12847849
Internal stem discolorationCausesPMC12847849

Displaying health effects 1 – 2 of 2 in total