Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpb | SAMN04490193_0127 | Not Available | Positive | 123466 - 126030 | 95431.8 |
| Trna-asn | Not Available | Not Available | Positive | 126334 - 126409 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 126419 - 126495 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 126501 - 126576 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 126766 - 126842 | Not Available |
| site-specific recombinase xerd | SAMN04490193_0132 | Not Available | Negative | 127014 - 128348 | 50739.0 |
| integrating conjugative element relaxase, pfl_4751 family | SAMN04490193_0133 | Not Available | Negative | 128345 - 130231 | 69299.7 |
| hypothetical protein | SAMN04490193_0134 | Not Available | Positive | 130627 - 130974 | 12684.3 |
| trag-like protein, n-terminal region | SAMN04490193_0135 | Not Available | Negative | 131046 - 132560 | 55277.8 |
| hypothetical protein | SAMN04490193_0136 | Not Available | Negative | 132557 - 132937 | 14539.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





