Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04490193_0116 | Not Available | Positive | 115123 - 116070 | 34504.1 |
| type iv fimbrial biogenesis protein fimt | SAMN04490193_0117 | Not Available | Negative | 116024 - 116605 | 20840.8 |
| type iv pilus assembly protein pilv | SAMN04490193_0118 | Not Available | Positive | 116809 - 117294 | 17346.7 |
| type iv pilus assembly protein pilw | SAMN04490193_0119 | Not Available | Positive | 117291 - 117992 | 24866.2 |
| type iv pilus assembly protein pilx | SAMN04490193_0120 | Not Available | Positive | 118038 - 118529 | 17237.9 |
| type iv pilus assembly protein pile | SAMN04490193_0121 | Not Available | Positive | 118541 - 118942 | 14295.0 |
| glycine oxidase | SAMN04490193_0122 | Not Available | Positive | 118939 - 120114 | 41502.1 |
| uncharacterized protein | SAMN04490193_0123 | Not Available | Negative | 120101 - 120334 | 8921.88 |
| beta-barrel assembly machine subunit bamd | SAMN04490193_0124 | Not Available | Negative | 120460 - 121485 | 38697.3 |
| conserved hypothetical protein | SAMN04490193_0126 | Not Available | Positive | 122594 - 123319 | 26028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





