Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferases | SAMN04490193_0106 | Not Available | Negative | 104029 - 104928 | 34800.5 |
| phosphotransacetylase | SAMN04490193_0107 | Not Available | Negative | 104929 - 107028 | 75362.4 |
| protein of unknown function | SAMN04490193_0108 | Not Available | Negative | 107108 - 107383 | 10369.0 |
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | SAMN04490193_0109 | Not Available | Positive | 107397 - 107882 | 16962.7 |
| ssu ribosomal protein s20p | SAMN04490193_0110 | Not Available | Negative | 108087 - 108365 | 10084.4 |
| putative peptidoglycan lipid ii flippase | SAMN04490193_0111 | Not Available | Positive | 108619 - 110157 | 56129.9 |
| fmn adenylyltransferase /riboflavin kinase | SAMN04490193_0112 | Not Available | Positive | 110277 - 111215 | 34317.4 |
| isoleucyl-trna synthetase | SAMN04490193_0113 | Not Available | Positive | 111230 - 114061 | 105735.0 |
| signal peptidase ii aspartic peptidase. merops family a08 | SAMN04490193_0114 | Not Available | Positive | 114054 - 114566 | 18833.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slpa | SAMN04490193_0115 | Not Available | Positive | 114559 - 115011 | 16375.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





