Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine-protein kinase stk1 | SAMN04490193_3212 | Not Available | Negative | 3435781 - 3436623 | 31222.6 |
| serine/threonine protein phosphatase stp1 | SAMN04490193_3213 | Not Available | Negative | 3436620 - 3437345 | 26352.5 |
| type vi secretion system protein impl | SAMN04490193_3214 | Not Available | Negative | 3437342 - 3440716 | 127216.0 |
| type vi secretion system protein impk | SAMN04490193_3215 | Not Available | Negative | 3440732 - 3441595 | 31765.3 |
| type vi secretion system protein impj | SAMN04490193_3216 | Not Available | Negative | 3441601 - 3442929 | 49027.2 |
| type vi secretion system protein vasd | SAMN04490193_3217 | Not Available | Negative | 3442916 - 3443416 | 18633.6 |
| fha domain protein | SAMN04490193_3218 | Not Available | Negative | 3443422 - 3444606 | 42620.6 |
| hypothetical protein | SAMN04490193_3219 | Not Available | Negative | 3444623 - 3444754 | 4886.79 |
| sigma-54 dependent transcriptional regulator | SAMN04490193_3220 | Not Available | Negative | 3444814 - 3446346 | 55346.2 |
| type vi secretion system protein vasg | SAMN04490193_3221 | Not Available | Negative | 3446343 - 3448775 | 88510.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





