Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ca-activated chloride channel family protein | SAMN04490193_3182 | Not Available | Positive | 3388577 - 3390316 | 63974.9 |
| oxygen tolerance | SAMN04490193_3183 | Not Available | Positive | 3390313 - 3391953 | 59713.6 |
| exodeoxyribonuclease i subunit d | SAMN04490193_3184 | Not Available | Positive | 3392646 - 3393887 | 46131.1 |
| exonuclease sbcc | SAMN04490193_3185 | Not Available | Positive | 3393884 - 3397522 | 135861.0 |
| glutathione s-transferase | SAMN04490193_3186 | Not Available | Positive | 3397519 - 3398112 | 22407.2 |
| hypothetical protein | SAMN04490193_3187 | Not Available | Negative | 3398109 - 3398234 | 4410.47 |
| hypothetical protein | SAMN04490193_3188 | Not Available | Negative | 3398406 - 3398585 | 6194.28 |
| 6-phosphogluconolactonase, cycloisomerase 2 family | SAMN04490193_3189 | Not Available | Negative | 3398742 - 3399917 | 42041.7 |
| hypothetical protein | SAMN04490193_3190 | Not Available | Negative | 3399904 - 3400203 | 10955.7 |
| hypothetical protein | SAMN04490193_3191 | Not Available | Positive | 3400475 - 3405226 | 177487.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





