Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04490193_3162 | Not Available | Positive | 3364683 - 3365183 | 18464.9 |
| hypothetical protein | SAMN04490193_3163 | Not Available | Positive | 3365242 - 3365667 | 15370.8 |
| nicotinamidase-related amidase | SAMN04490193_3164 | Not Available | Positive | 3365944 - 3366468 | 18819.8 |
| lactate dehydrogenase | SAMN04490193_3165 | Not Available | Positive | 3366596 - 3367549 | 33574.6 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN04490193_3166 | Not Available | Positive | 3367679 - 3368746 | 40376.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_3167 | Not Available | Positive | 3368757 - 3369524 | 26793.5 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04490193_3168 | Not Available | Positive | 3369595 - 3371028 | 52566.6 |
| cupin domain protein | SAMN04490193_3169 | Not Available | Positive | 3371113 - 3371514 | 14454.3 |
| dna-3-methyladenine glycosylase i | SAMN04490193_3170 | Not Available | Negative | 3371570 - 3372199 | 23851.6 |
| aerobic c4-dicarboxylate transport protein | SAMN04490193_3171 | Not Available | Positive | 3372432 - 3373742 | 46344.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





