Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymethylenebutenolidase | SAMN04490193_3135 | Not Available | Positive | 3330605 - 3331492 | 32144.1 |
| lysr family transcriptional regulator, regulator of gene expression of beta-lactamase | SAMN04490193_3136 | Not Available | Negative | 3331652 - 3332530 | 32132.9 |
| beta-lactamase class c | SAMN04490193_3137 | Not Available | Positive | 3332658 - 3333812 | 40943.9 |
| c4-dicarboxylate transporter, dctm subunit | SAMN04490193_3138 | Not Available | Negative | 3333902 - 3335182 | 45058.8 |
| c4-dicarboxylate transporter, dctq subunit | SAMN04490193_3139 | Not Available | Negative | 3335182 - 3335814 | 23525.0 |
| c4-dicarboxylate-binding protein dctp | SAMN04490193_3140 | Not Available | Negative | 3335862 - 3336845 | 36575.9 |
| (s)-citramalyl-coa lyase | SAMN04490193_3141 | Not Available | Negative | 3337001 - 3337813 | 28573.4 |
| itaconate coa-transferase | SAMN04490193_3142 | Not Available | Negative | 3337828 - 3339021 | 42667.8 |
| 2-methylcitrate dehydratase prpd | SAMN04490193_3143 | Not Available | Negative | 3339031 - 3340380 | 47550.5 |
| acyl-coa dehydrogenase | SAMN04490193_3144 | Not Available | Negative | 3340391 - 3341554 | 42671.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





