Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, fsr family, fosmidomycin resistance protein | SAMN04490193_3114 | Not Available | Positive | 3312372 - 3313583 | 42881.5 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_3115 | Not Available | Positive | 3313694 - 3314857 | 41980.0 |
| myo-inositol 2-dehydrogenase | SAMN04490193_3116 | Not Available | Negative | 3314845 - 3315849 | 36477.6 |
| transcriptional regulator, laci family | SAMN04490193_3117 | Not Available | Negative | 3315885 - 3316910 | 37805.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_3118 | Not Available | Positive | 3317033 - 3317875 | 30076.0 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04490193_3119 | Not Available | Positive | 3317875 - 3319008 | 41750.7 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04490193_3120 | Not Available | Positive | 3319044 - 3319967 | 33169.2 |
| protein of unknown function | SAMN04490193_3121 | Not Available | Negative | 3320015 - 3320335 | 11865.8 |
| helix-turn-helix domain-containing protein | SAMN04490193_3122 | Not Available | Positive | 3320418 - 3321203 | 27752.5 |
| amidase | SAMN04490193_3123 | Not Available | Positive | 3321260 - 3322966 | 60346.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





