Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_2975 | Not Available | Negative | 3163283 - 3163471 | 6912.95 |
| nitt/taut family transport system permease protein | SAMN04490193_2976 | Not Available | Negative | 3163652 - 3164419 | 27826.1 |
| nitt/taut family transport system substrate-binding protein | SAMN04490193_2977 | Not Available | Negative | 3164416 - 3165615 | 43638.3 |
| nitt/taut family transport system atp-binding protein | SAMN04490193_2978 | Not Available | Negative | 3165602 - 3166405 | 28896.2 |
| acyl-coa dehydrogenase | SAMN04490193_2979 | Not Available | Negative | 3166402 - 3167463 | 37638.4 |
| uncharacterized peroxidase-related enzyme | SAMN04490193_2980 | Not Available | Negative | 3167504 - 3168064 | 19787.7 |
| arac-type dna-binding protein | SAMN04490193_2981 | Not Available | Positive | 3168166 - 3169071 | 32882.6 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_2982 | Not Available | Negative | 3169068 - 3169979 | 33395.8 |
| predicted oxidoreductase | SAMN04490193_2983 | Not Available | Positive | 3170096 - 3171091 | 35886.9 |
| effector protein | SAMN04490193_2984 | Not Available | Positive | 3171256 - 3172818 | 55927.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





