Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux pump | SAMN04490193_2953 | Not Available | Negative | 3136477 - 3139590 | 109952.0 |
| membrane fusion protein, multidrug efflux system | SAMN04490193_2954 | Not Available | Negative | 3139593 - 3140762 | 40791.9 |
| two-component system, ompr family, sensor histidine kinase baes | SAMN04490193_2955 | Not Available | Positive | 3140877 - 3142295 | 52476.3 |
| two-component system, ompr family, response regulator baer | SAMN04490193_2956 | Not Available | Positive | 3142299 - 3142994 | 25969.6 |
| trehalose synthase | SAMN04490193_2957 | Not Available | Negative | 3143042 - 3145105 | 75776.3 |
| arac-type dna-binding protein | SAMN04490193_2958 | Not Available | Negative | 3145739 - 3146500 | 28599.7 |
| 4-hydroxyproline epimerase | SAMN04490193_2959 | Not Available | Positive | 3146712 - 3147638 | 32994.2 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04490193_2960 | Not Available | Positive | 3147679 - 3148617 | 33562.1 |
| d-amino-acid dehydrogenase | SAMN04490193_2961 | Not Available | Positive | 3148621 - 3149880 | 45562.4 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04490193_2962 | Not Available | Negative | 3150648 - 3151655 | 37639.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





