Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculose-phosphate aldolase | SAMN04490193_2943 | Not Available | Positive | 3122883 - 3123542 | 23720.3 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN04490193_2944 | Not Available | Positive | 3123539 - 3124438 | 32476.9 |
| amino acid abc transporter membrane protein 1, paat family | SAMN04490193_2945 | Not Available | Positive | 3124431 - 3125174 | 27072.5 |
| polar amino acid transport system permease protein | SAMN04490193_2946 | Not Available | Positive | 3125164 - 3125841 | 25113.4 |
| cystathionine beta-lyase | SAMN04490193_2947 | Not Available | Positive | 3125838 - 3127040 | 43678.3 |
| abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein | SAMN04490193_2948 | Not Available | Positive | 3127037 - 3128071 | 37890.1 |
| iron complex outermembrane recepter protein | SAMN04490193_2949 | Not Available | Positive | 3128098 - 3130386 | 84576.1 |
| membrane dipeptidase | SAMN04490193_2950 | Not Available | Positive | 3130389 - 3131591 | 43762.3 |
| hypothetical protein | SAMN04490193_2951 | Not Available | Positive | 3131750 - 3135073 | 124418.0 |
| outer membrane protein, multidrug efflux system | SAMN04490193_2952 | Not Available | Negative | 3135095 - 3136480 | 49777.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





