Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloramphenicol-sensitive protein rard | SAMN04490193_2862 | Not Available | Positive | 3041558 - 3042439 | 32597.3 |
| chaperone protein ecpd | SAMN04490193_2863 | Not Available | Negative | 3042408 - 3043190 | 27815.6 |
| pilin (type 1 fimbria component protein) | SAMN04490193_2864 | Not Available | Negative | 3043187 - 3044221 | 35454.7 |
| outer membrane usher protein | SAMN04490193_2865 | Not Available | Negative | 3044286 - 3046874 | 91407.6 |
| chaperone protein ecpd | SAMN04490193_2866 | Not Available | Negative | 3047027 - 3047818 | 28971.9 |
| major type 1 subunit fimbrin (pilin) | SAMN04490193_2867 | Not Available | Negative | 3047903 - 3048466 | 18474.6 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN04490193_2868 | Not Available | Negative | 3048697 - 3049773 | 40184.0 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04490193_2869 | Not Available | Negative | 3050020 - 3050943 | 32860.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_2870 | Not Available | Positive | 3051021 - 3051947 | 33962.8 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN04490193_2871 | Not Available | Positive | 3051979 - 3053535 | 57405.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





