Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_2832 | Not Available | Negative | 3005215 - 3005982 | 25827.4 |
| putative membrane protein | SAMN04490193_2833 | Not Available | Positive | 3006132 - 3007076 | 35012.8 |
| tfp pilus assembly protein pilf | SAMN04490193_2834 | Not Available | Positive | 3007148 - 3008206 | 39013.9 |
| circadian clock protein kaic | SAMN04490193_2835 | Not Available | Positive | 3008318 - 3009820 | 55130.5 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04490193_2836 | Not Available | Positive | 3009817 - 3011487 | 60283.8 |
| response regulator receiver domain-containing protein | SAMN04490193_2837 | Not Available | Negative | 3011550 - 3011927 | 13862.9 |
| signal transduction histidine kinase | SAMN04490193_2838 | Not Available | Negative | 3012006 - 3013199 | 44363.7 |
| two-component system, chemotaxis family, response regulator cheb | SAMN04490193_2839 | Not Available | Negative | 3013193 - 3013792 | 21031.2 |
| mcp methyltransferase, cher-type | SAMN04490193_2840 | Not Available | Negative | 3013789 - 3014604 | 31136.2 |
| signal transduction histidine kinase | SAMN04490193_2841 | Not Available | Negative | 3014620 - 3018117 | 130993.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





