Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrile hydratase | SAMN04490193_0046 | Not Available | Negative | 50785 - 51417 | 23260.6 |
| hemoglobin | SAMN04490193_0047 | Not Available | Negative | 51509 - 51997 | 18335.9 |
| hypothetical protein | SAMN04490193_0048 | Not Available | Negative | 52288 - 52455 | 6579.84 |
| Trna-met | Not Available | Not Available | Positive | 52714 - 52790 | Not Available |
| rna polymerase sigma factor, sigma-70 family | SAMN04490193_0050 | Not Available | Negative | 53151 - 53702 | 21495.4 |
| type iii secretion protein w | SAMN04490193_0051 | Not Available | Positive | 53914 - 55056 | 41586.6 |
| type iii secretion protein v | SAMN04490193_0052 | Not Available | Positive | 55053 - 57146 | 76108.5 |
| type iii secretion protein d | SAMN04490193_0053 | Not Available | Positive | 57178 - 58098 | 33384.7 |
| atp synthase in type iii secretion protein n | SAMN04490193_0054 | Not Available | Positive | 58095 - 59453 | 48948.2 |
| type iii secretion protein ysco | SAMN04490193_0055 | Not Available | Positive | 59440 - 59868 | 16091.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





