Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_2802 | Not Available | Negative | 2973737 - 2974486 | 25845.1 |
| dna-binding transcriptional regulator, hxlr family | SAMN04490193_2803 | Not Available | Positive | 2974586 - 2974945 | 13274.1 |
| response regulator receiver domain-containing protein | SAMN04490193_2804 | Not Available | Negative | 2975025 - 2975426 | 15209.5 |
| pas fold-containing protein | SAMN04490193_2805 | Not Available | Negative | 2975429 - 2976757 | 49200.8 |
| chemotaxis protein chec | SAMN04490193_2806 | Not Available | Negative | 2976770 - 2977381 | 22533.4 |
| response regulator receiver domain-containing protein | SAMN04490193_2807 | Not Available | Negative | 2977381 - 2977740 | 12866.8 |
| deoxyribose-phosphate aldolase | SAMN04490193_2808 | Not Available | Negative | 2977930 - 2978613 | 23483.3 |
| transcriptional regulator, deor family | SAMN04490193_2809 | Not Available | Positive | 2978742 - 2979500 | 28529.2 |
| protein of unknown function | SAMN04490193_2810 | Not Available | Negative | 2979497 - 2980543 | 38551.1 |
| mfs transporter, fhs family, l-fucose permease | SAMN04490193_2811 | Not Available | Negative | 2980540 - 2981871 | 48277.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





