Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein aprd | SAMN04490193_2751 | Not Available | Positive | 2907155 - 2908882 | 62329.2 |
| membrane fusion protein, protease secretion system | SAMN04490193_2752 | Not Available | Positive | 2908980 - 2910272 | 47517.6 |
| outer membrane protein aprf | SAMN04490193_2753 | Not Available | Positive | 2910275 - 2911612 | 49755.0 |
| hypothetical protein | SAMN04490193_2754 | Not Available | Positive | 2911653 - 2913077 | 49887.9 |
| protein of unknown function | SAMN04490193_2755 | Not Available | Negative | 2913134 - 2913358 | 8093.82 |
| vrr-nuc domain-containing protein | SAMN04490193_2756 | Not Available | Positive | 2913535 - 2915193 | 63841.8 |
| rad3-related dna helicase | SAMN04490193_2757 | Not Available | Positive | 2915190 - 2917442 | 84101.7 |
| hypothetical protein | SAMN04490193_2759 | Not Available | Negative | 2917738 - 2919312 | 57576.9 |
| hypothetical protein | SAMN04490193_2760 | Not Available | Positive | 2919557 - 2921938 | 87023.5 |
| hypothetical protein | SAMN04490193_2761 | Not Available | Positive | 2922396 - 2926748 | 156955.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





