Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04490193_2741 | Not Available | Negative | 2896771 - 2897043 | 9823.96 |
| arac-type dna-binding protein | SAMN04490193_2742 | Not Available | Positive | 2897301 - 2898110 | 30973.3 |
| glycine/d-amino acid oxidase | SAMN04490193_2743 | Not Available | Positive | 2898159 - 2899565 | 51819.4 |
| hypothetical protein | SAMN04490193_2744 | Not Available | Positive | 2899593 - 2899934 | 12409.8 |
| putrescine transport system substrate-binding protein | SAMN04490193_2745 | Not Available | Positive | 2899995 - 2901074 | 39706.6 |
| regulatory protein, luxr family | SAMN04490193_2746 | Not Available | Negative | 2901369 - 2902154 | 29538.5 |
| amino acid transporter | SAMN04490193_2747 | Not Available | Positive | 2902355 - 2903719 | 48035.2 |
| d-aminopeptidase | SAMN04490193_2748 | Not Available | Positive | 2903729 - 2904832 | 38898.6 |
| epralysin. metallo peptidase. merops family m10b | SAMN04490193_2749 | Not Available | Positive | 2905200 - 2906633 | 49382.2 |
| protease inhibitor inh | SAMN04490193_2750 | Not Available | Positive | 2906683 - 2907051 | 13274.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





