Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_2648 | Not Available | Negative | 2797539 - 2798324 | 28558.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04490193_2649 | Not Available | Negative | 2798364 - 2799821 | 51173.4 |
| rnd family efflux transporter, mfp subunit | SAMN04490193_2650 | Not Available | Positive | 2800123 - 2801232 | 38254.4 |
| multidrug efflux pump subunit acrb | SAMN04490193_2651 | Not Available | Positive | 2801229 - 2804318 | 112118.0 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN04490193_2652 | Not Available | Positive | 2804500 - 2805405 | 33526.5 |
| uncharacterized membrane protein | SAMN04490193_2653 | Not Available | Positive | 2805480 - 2806307 | 28703.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_2654 | Not Available | Positive | 2806337 - 2807098 | 26676.0 |
| predicted arabinose efflux permease, mfs family | SAMN04490193_2656 | Not Available | Positive | 2808207 - 2809457 | 42463.3 |
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN04490193_2657 | Not Available | Positive | 2809507 - 2810856 | 47664.3 |
| hypothetical protein | SAMN04490193_2658 | Not Available | Positive | 2810853 - 2812505 | 61152.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





