Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin, oprd family | SAMN04490193_0026 | Not Available | Negative | 31162 - 32481 | 48198.4 |
| protein of unknown function | SAMN04490193_0027 | Not Available | Positive | 32707 - 33039 | 11992.6 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN04490193_0028 | Not Available | Positive | 33150 - 33725 | 21022.0 |
| arac-type dna-binding protein | SAMN04490193_0029 | Not Available | Negative | 33732 - 34541 | 30329.1 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04490193_0030 | Not Available | Positive | 34679 - 35317 | 22676.2 |
| d-alanine-d-alanine ligase | SAMN04490193_0031 | Not Available | Positive | 35362 - 36456 | 39052.9 |
| conserved hypothetical protein | SAMN04490193_0032 | Not Available | Negative | 36623 - 37345 | 26311.2 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN04490193_0033 | Not Available | Negative | 37369 - 39180 | 63591.4 |
| phenazine biosynthesis protein phzf family | SAMN04490193_0034 | Not Available | Negative | 39235 - 40014 | 28486.8 |
| outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid | SAMN04490193_0035 | Not Available | Negative | 40115 - 42556 | 89531.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





