Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_2596 | Not Available | Positive | 2739138 - 2739260 | 4273.21 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN04490193_2598 | Not Available | Positive | 2740283 - 2741614 | 48622.7 |
| peptide/nickel transport system atp-binding protein | SAMN04490193_2599 | Not Available | Negative | 2741618 - 2743249 | 59165.9 |
| peptide/nickel transport system permease protein | SAMN04490193_2600 | Not Available | Negative | 2743246 - 2744130 | 30953.6 |
| peptide/nickel transport system permease protein | SAMN04490193_2601 | Not Available | Negative | 2744134 - 2745084 | 34002.1 |
| peptide/nickel transport system substrate-binding protein | SAMN04490193_2602 | Not Available | Negative | 2745081 - 2746712 | 59077.1 |
| iron complex outermembrane recepter protein | SAMN04490193_2603 | Not Available | Negative | 2746739 - 2749171 | 87798.0 |
| pas domain s-box-containing protein | SAMN04490193_2604 | Not Available | Positive | 2749699 - 2752572 | 105631.0 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN04490193_2605 | Not Available | Positive | 2752572 - 2753201 | 23332.9 |
| methyl-accepting chemotaxis protein | SAMN04490193_2606 | Not Available | Positive | 2753365 - 2754549 | 42259.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





