Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component | SAMN04490193_2516 | Not Available | Positive | 2634368 - 2637046 | 97849.7 |
| hypothetical protein | SAMN04490193_2517 | Not Available | Negative | 2637182 - 2637673 | 19066.1 |
| ribonucleoside-diphosphate reductase beta chain | SAMN04490193_2518 | Not Available | Negative | 2637727 - 2638977 | 47080.1 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04490193_2519 | Not Available | Negative | 2639212 - 2640624 | 51741.8 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04490193_2520 | Not Available | Positive | 2640749 - 2641381 | 22630.4 |
| diguanylate cyclase | SAMN04490193_2521 | Not Available | Positive | 2641467 - 2642525 | 38994.6 |
| glutamate carboxypeptidase | SAMN04490193_2522 | Not Available | Positive | 2642572 - 2643801 | 43498.2 |
| rhs repeat-associated core domain-containing protein | SAMN04490193_2523 | Not Available | Negative | 2644245 - 2648966 | 177346.0 |
| multidrug efflux pump subunit acrb | SAMN04490193_2524 | Not Available | Negative | 2649077 - 2652160 | 112185.0 |
| rnd family efflux transporter, mfp subunit | SAMN04490193_2525 | Not Available | Negative | 2652163 - 2653269 | 39133.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





