Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04490193_0016 | Not Available | Positive | 18158 - 18448 | 10309.6 |
| uncharacterized conserved protein, contains hepn domain | SAMN04490193_0017 | Not Available | Positive | 18445 - 18789 | 12925.5 |
| short-chain fatty acids transporter | SAMN04490193_0018 | Not Available | Negative | 18828 - 20246 | 50598.5 |
| predicted arabinose efflux permease, mfs family | SAMN04490193_0019 | Not Available | Positive | 20432 - 21721 | 46232.2 |
| gluconate:h+ symporter, gntp family | SAMN04490193_0020 | Not Available | Negative | 21725 - 23095 | 46943.8 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN04490193_0021 | Not Available | Positive | 23281 - 24501 | 44272.5 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04490193_0022 | Not Available | Positive | 24520 - 25626 | 39910.5 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04490193_0023 | Not Available | Positive | 25645 - 28791 | 112877.0 |
| two-component system, ompr family, heavy metal sensor histidine kinase cuss | SAMN04490193_0024 | Not Available | Negative | 28715 - 30151 | 52199.1 |
| two-component system, ompr family, copper resistance phosphate regulon response regulator cusr | SAMN04490193_0025 | Not Available | Negative | 30148 - 30822 | 25679.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





