Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, multidrug efflux system | SAMN04490193_2484 | Not Available | Positive | 2592445 - 2593743 | 46399.3 |
| multidrug efflux pump | SAMN04490193_2485 | Not Available | Positive | 2593740 - 2596841 | 111400.0 |
| multidrug efflux pump | SAMN04490193_2486 | Not Available | Positive | 2596838 - 2599945 | 111665.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04490193_2487 | Not Available | Positive | 2599942 - 2601507 | 56169.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN04490193_2488 | Not Available | Positive | 2601689 - 2603785 | 75101.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_2489 | Not Available | Positive | 2603840 - 2604586 | 26165.4 |
| dna-binding transcriptional regulator, mocr family, contains an aminotransferase domain | SAMN04490193_2490 | Not Available | Negative | 2604911 - 2606320 | 52150.2 |
| cytochrome c oxidase accessory protein fixg | SAMN04490193_2491 | Not Available | Negative | 2606398 - 2607807 | 52432.8 |
| protein of unknown function | SAMN04490193_2492 | Not Available | Negative | 2607992 - 2608231 | 8761.29 |
| putative mg2+ transporter-c (mgtc) family protein | SAMN04490193_2493 | Not Available | Positive | 2608350 - 2608847 | 17409.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





