Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine/homoserine lactone efflux protein | SAMN04490193_2452 | Not Available | Negative | 2548469 - 2549074 | 21050.3 |
| arac-type dna-binding protein | SAMN04490193_2453 | Not Available | Negative | 2549129 - 2549968 | 31712.4 |
| uncharacterized membrane protein | SAMN04490193_2454 | Not Available | Negative | 2550041 - 2550682 | 23050.4 |
| multidrug efflux pump | SAMN04490193_2455 | Not Available | Negative | 2550774 - 2553863 | 110050.0 |
| membrane fusion protein, multidrug efflux system | SAMN04490193_2456 | Not Available | Negative | 2553876 - 2555033 | 41449.5 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04490193_2457 | Not Available | Positive | 2555205 - 2555906 | 26216.6 |
| two-component system, ompr family, sensor kinase | SAMN04490193_2458 | Not Available | Positive | 2555910 - 2557214 | 49103.4 |
| methyltransferase domain-containing protein | SAMN04490193_2459 | Not Available | Positive | 2557273 - 2558043 | 27994.5 |
| hypothetical protein | SAMN04490193_2460 | Not Available | Positive | 2558135 - 2558920 | 27403.5 |
| acyl-coa dehydrogenase | SAMN04490193_2462 | Not Available | Negative | 2559072 - 2560310 | 44822.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





