Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase propeptide and ypeb domain-containing protein | SAMN04490193_2432 | Not Available | Positive | 2521350 - 2521619 | 9391.12 |
| hypothetical protein | SAMN04490193_2433 | Not Available | Negative | 2521640 - 2526802 | 193764.0 |
| delta1-piperideine-2-carboxylate reductase | SAMN04490193_2434 | Not Available | Positive | 2526995 - 2528029 | 36043.1 |
| membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, elab/yqjd/duf883 family | SAMN04490193_2435 | Not Available | Negative | 2528185 - 2528505 | 11421.6 |
| hypothetical protein | SAMN04490193_2436 | Not Available | Positive | 2528671 - 2528925 | 9618.47 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_2437 | Not Available | Negative | 2528897 - 2529826 | 33369.4 |
| nitrilase | SAMN04490193_2438 | Not Available | Positive | 2529908 - 2530834 | 32756.6 |
| late embryogenesis abundant protein | SAMN04490193_2439 | Not Available | Negative | 2531136 - 2531597 | 16683.4 |
| xanthine permease xanp | SAMN04490193_2440 | Not Available | Negative | 2531611 - 2533038 | 50204.7 |
| methyl-accepting chemotaxis protein | SAMN04490193_2441 | Not Available | Positive | 2533273 - 2534898 | 57490.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





