Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04490193_2412 | Not Available | Positive | 2501741 - 2502457 | 26534.9 |
| snoal-like domain-containing protein | SAMN04490193_2413 | Not Available | Positive | 2502509 - 2502844 | 12219.5 |
| cell division protein zape | SAMN04490193_2414 | Not Available | Positive | 2502860 - 2503963 | 41517.9 |
| acetyltransferase (gnat) family protein | SAMN04490193_2415 | Not Available | Positive | 2504137 - 2504628 | 17852.6 |
| hypothetical protein | SAMN04490193_2416 | Not Available | Negative | 2504731 - 2504940 | 7433.59 |
| outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid | SAMN04490193_2417 | Not Available | Negative | 2505085 - 2507310 | 81665.9 |
| heptose-i-phosphate ethanolaminephosphotransferase | SAMN04490193_2418 | Not Available | Negative | 2507425 - 2509182 | 66479.5 |
| hypothetical protein | SAMN04490193_2419 | Not Available | Negative | 2509343 - 2509522 | 6860.36 |
| 6-phosphogluconate dehydrogenase | SAMN04490193_2420 | Not Available | Positive | 2509794 - 2510777 | 35285.0 |
| glucose-6-phosphate 1-dehydrogenase | SAMN04490193_2421 | Not Available | Positive | 2510774 - 2512297 | 56072.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





