Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system, substrate-binding protein, contains n-terminal xre family hth domain | SAMN04490193_2392 | Not Available | Positive | 2475898 - 2476965 | 39061.3 |
| protein of unknown function | SAMN04490193_2393 | Not Available | Negative | 2476962 - 2477180 | 7877.78 |
| methionine synthase (b12-dependent) | SAMN04490193_2394 | Not Available | Negative | 2477233 - 2480943 | 135580.0 |
| fatty acid cis/trans isomerase (cti) | SAMN04490193_2395 | Not Available | Positive | 2481109 - 2483400 | 86019.7 |
| fe/s biogenesis protein nfua | SAMN04490193_2396 | Not Available | Positive | 2483494 - 2484078 | 21032.7 |
| precorrin-4 c11-methyltransferase | SAMN04490193_2397 | Not Available | Negative | 2484264 - 2485010 | 26725.2 |
| cobalt-precorrin 5a hydrolase | SAMN04490193_2398 | Not Available | Negative | 2485081 - 2485473 | 13529.4 |
| cobalt transporter subunit cbta | SAMN04490193_2399 | Not Available | Negative | 2485470 - 2486174 | 24954.4 |
| cobalt transporter subunit cbtb | SAMN04490193_2400 | Not Available | Negative | 2486186 - 2486374 | 6383.48 |
| cobalamin biosynthesis protein cobw | SAMN04490193_2401 | Not Available | Positive | 2487011 - 2488072 | 38390.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





