Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin c transport system atp-binding protein | SAMN04490193_2372 | Not Available | Negative | 2453276 - 2454889 | 59616.9 |
| microcin c transport system permease protein | SAMN04490193_2373 | Not Available | Negative | 2454891 - 2455910 | 37869.6 |
| microcin c transport system permease protein | SAMN04490193_2374 | Not Available | Negative | 2455912 - 2456988 | 39443.8 |
| microcin c transport system substrate-binding protein | SAMN04490193_2375 | Not Available | Negative | 2456989 - 2458833 | 69969.1 |
| microcin c transport system substrate-binding protein | SAMN04490193_2376 | Not Available | Negative | 2458830 - 2460659 | 69717.0 |
| membrane-bound lytic murein transglycosylase d | SAMN04490193_2377 | Not Available | Negative | 2460804 - 2462219 | 52928.6 |
| hydroxyacylglutathione hydrolase | SAMN04490193_2378 | Not Available | Negative | 2462318 - 2463085 | 28437.4 |
| methyltransferase domain-containing protein | SAMN04490193_2379 | Not Available | Positive | 2463151 - 2463909 | 27946.0 |
| rnase hi | SAMN04490193_2380 | Not Available | Positive | 2463954 - 2464406 | 16966.2 |
| dna polymerase-3 subunit epsilon | SAMN04490193_2381 | Not Available | Positive | 2464483 - 2465229 | 26956.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





