Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, murr/rpir family, contains hth and sis domains | SAMN04490193_2331 | Not Available | Negative | 2411747 - 2412655 | 33949.6 |
| transposase | SAMN04490193_2332 | Not Available | Negative | 2412735 - 2413940 | 46752.2 |
| 5-dehydro-2-deoxygluconokinase | SAMN04490193_2333 | Not Available | Positive | 2414256 - 2416193 | 71323.3 |
| 2-keto-myo-inositol dehydratase | SAMN04490193_2334 | Not Available | Positive | 2416295 - 2417188 | 32891.1 |
| 5-deoxyglucuronate isomerase | SAMN04490193_2335 | Not Available | Positive | 2417185 - 2417973 | 29160.3 |
| 2-keto-myo-inositol isomerase | SAMN04490193_2336 | Not Available | Positive | 2417997 - 2418812 | 29747.6 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | SAMN04490193_2337 | Not Available | Positive | 2418823 - 2420754 | 69615.1 |
| myo-inositol 2-dehydrogenase / d-chiro-inositol 1-dehydrogenase | SAMN04490193_2338 | Not Available | Positive | 2420774 - 2421784 | 36657.0 |
| predicted dehydrogenase | SAMN04490193_2339 | Not Available | Positive | 2422024 - 2423052 | 37470.2 |
| hypothetical protein | SAMN04490193_2340 | Not Available | Positive | 2423180 - 2423356 | 6419.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





