Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN04490193_2321 | Not Available | Positive | 2400144 - 2401247 | 39288.0 |
| transposase and inactivated derivatives, is30 family | SAMN04490193_2322 | Not Available | Positive | 2401363 - 2402511 | 44105.3 |
| helix-turn-helix domain-containing protein | SAMN04490193_2323 | Not Available | Negative | 2402642 - 2403529 | 33233.7 |
| l-glutamine synthetase | SAMN04490193_2324 | Not Available | Positive | 2403668 - 2405026 | 50788.7 |
| putrescine transport system substrate-binding protein | SAMN04490193_2325 | Not Available | Positive | 2405049 - 2406137 | 39811.5 |
| glycine/d-amino acid oxidase | SAMN04490193_2326 | Not Available | Positive | 2406134 - 2407429 | 46630.1 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04490193_2327 | Not Available | Positive | 2407487 - 2407903 | 14637.2 |
| signal transduction histidine kinase | SAMN04490193_2328 | Not Available | Negative | 2408239 - 2409633 | 51610.3 |
| two-component system, ompr family, response regulator | SAMN04490193_2329 | Not Available | Negative | 2409611 - 2410294 | 25328.8 |
| hypothetical protein | SAMN04490193_2330 | Not Available | Positive | 2410619 - 2411524 | 31121.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





