Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent dipeptidase, dipeptidase homolog | SAMN04490193_2311 | Not Available | Negative | 2387110 - 2388459 | 49236.6 |
| hypothetical protein | SAMN04490193_2312 | Not Available | Positive | 2388602 - 2390233 | 61954.3 |
| methionine-gamma-lyase | SAMN04490193_2313 | Not Available | Negative | 2390169 - 2391452 | 45398.4 |
| dna-binding transcriptional regulator, lrp family | SAMN04490193_2314 | Not Available | Positive | 2391576 - 2392046 | 17402.1 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04490193_2315 | Not Available | Positive | 2392147 - 2392584 | 16133.4 |
| iron complex outermembrane recepter protein | SAMN04490193_2316 | Not Available | Negative | 2392767 - 2394914 | 78227.7 |
| meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductase | SAMN04490193_2317 | Not Available | Positive | 2395106 - 2395885 | 26699.3 |
| transcriptional regulator of acetoin/glycerol metabolism | SAMN04490193_2318 | Not Available | Negative | 2395955 - 2397814 | 68327.1 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN04490193_2319 | Not Available | Positive | 2398124 - 2399101 | 34397.8 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN04490193_2320 | Not Available | Positive | 2399128 - 2400147 | 36858.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





