Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted nuclease of the rnase h fold, hicb family | SAMN04490193_2299 | Not Available | Negative | 2341457 - 2341822 | 13339.9 |
| hica toxin of toxin-antitoxin | SAMN04490193_2300 | Not Available | Negative | 2341819 - 2342070 | 9520.74 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN04490193_2301 | Not Available | Positive | 2342280 - 2356310 | 514563.0 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN04490193_2302 | Not Available | Positive | 2356314 - 2364095 | 288111.0 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN04490193_2303 | Not Available | Positive | 2364106 - 2379066 | 551824.0 |
| outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid | SAMN04490193_2306 | Not Available | Negative | 2379572 - 2382007 | 89600.8 |
| putative atp-binding cassette transporter | SAMN04490193_2307 | Not Available | Negative | 2382109 - 2383761 | 60492.6 |
| formyl transferase | SAMN04490193_2308 | Not Available | Positive | 2383962 - 2384792 | 31085.8 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04490193_2309 | Not Available | Negative | 2384915 - 2385787 | 31902.5 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04490193_2310 | Not Available | Negative | 2385820 - 2387091 | 47500.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





