Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_2288 | Not Available | Positive | 2331413 - 2332186 | 26790.2 |
| hypothetical protein | SAMN04490193_2289 | Not Available | Negative | 2332352 - 2333068 | 27138.9 |
| protein of unknown function | SAMN04490193_2290 | Not Available | Positive | 2333261 - 2334043 | 28563.3 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04490193_2291 | Not Available | Negative | 2334231 - 2334923 | 25376.3 |
| nicotinamidase/pyrazinamidase | SAMN04490193_2292 | Not Available | Positive | 2335070 - 2335717 | 23091.7 |
| nicotinate phosphoribosyltransferase | SAMN04490193_2293 | Not Available | Positive | 2335729 - 2336946 | 47024.8 |
| nad+ synthase | SAMN04490193_2294 | Not Available | Positive | 2336948 - 2337754 | 28897.6 |
| putative efflux protein, mate family | SAMN04490193_2296 | Not Available | Positive | 2338194 - 2339549 | 48113.3 |
| dna-binding transcriptional regulator, acrr family | SAMN04490193_2297 | Not Available | Negative | 2339533 - 2340120 | 21283.5 |
| predicted arabinose efflux permease, mfs family | SAMN04490193_2298 | Not Available | Positive | 2340262 - 2341434 | 40487.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





