Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kef-type potassium/proton antiporter, cpa2 family | SAMN04490193_2268 | Not Available | Negative | 2314263 - 2316071 | 65384.5 |
| o-acetylserine/cysteine efflux transporter | SAMN04490193_2269 | Not Available | Negative | 2316198 - 2317055 | 30832.1 |
| arac-type dna-binding protein | SAMN04490193_2270 | Not Available | Positive | 2317160 - 2317942 | 28947.8 |
| uncharacterized protein yaaw, upf0174 family | SAMN04490193_2271 | Not Available | Positive | 2318036 - 2319589 | 56655.6 |
| manganese transport protein | SAMN04490193_2272 | Not Available | Positive | 2319631 - 2320950 | 47335.2 |
| pin domain nuclease, a component of toxin-antitoxin system (pin domain) | SAMN04490193_2273 | Not Available | Negative | 2320972 - 2321349 | 14015.0 |
| prevent-host-death family protein | SAMN04490193_2274 | Not Available | Negative | 2321346 - 2321585 | 8231.13 |
| dna-binding transcriptional regulator, lysr family | SAMN04490193_2275 | Not Available | Negative | 2321822 - 2322754 | 34799.8 |
| transporter family-2 protein | SAMN04490193_2276 | Not Available | Positive | 2322872 - 2323360 | 17038.7 |
| transporter family-2 protein | SAMN04490193_2277 | Not Available | Positive | 2323365 - 2323817 | 15684.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





