Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein j | SAMN04490193_2185 | Not Available | Negative | 2233387 - 2233998 | 22566.2 |
| general secretion pathway protein h | SAMN04490193_2186 | Not Available | Negative | 2233995 - 2234447 | 16785.4 |
| general secretion pathway protein c | SAMN04490193_2187 | Not Available | Positive | 2234541 - 2234972 | 14869.1 |
| type ii secretion system protein i (gspi) | SAMN04490193_2188 | Not Available | Negative | 2234959 - 2235324 | 13288.3 |
| general secretion pathway protein g | SAMN04490193_2189 | Not Available | Positive | 2235473 - 2235922 | 16240.6 |
| general secretion pathway protein k | SAMN04490193_2190 | Not Available | Positive | 2235931 - 2236809 | 32781.4 |
| general secretion pathway protein l | SAMN04490193_2191 | Not Available | Positive | 2236806 - 2237876 | 37714.2 |
| general secretion pathway protein m | SAMN04490193_2192 | Not Available | Positive | 2237869 - 2238381 | 18472.1 |
| general secretion pathway protein d | SAMN04490193_2193 | Not Available | Positive | 2238378 - 2240702 | 81425.6 |
| type ii secretion system protein e (gspe) | SAMN04490193_2195 | Not Available | Positive | 2240842 - 2242260 | 51435.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





