Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas marginalis |
| Strain | strain BS2952 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | metal contaminated soil |
| Biotic relationship | Not Available |
| Host(s) | Brassica oleracea var. italica |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426364 bp
Thymine Count
1441537 bp
Guanine Count
2205788 bp
Cytosine Count
2197626 bp
Genome Length
7271315 bp
Protein-coding Genes
6396 genes
Non-Coding Genes
251 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-arabinose transport system atp-binding protein | SAMN04490193_2143 | Not Available | Positive | 2192334 - 2193836 | 54056.1 |
| l-arabinose abc transporter membrane protein | SAMN04490193_2144 | Not Available | Positive | 2193846 - 2194814 | 33854.0 |
| transposase | SAMN04490193_2145 | Not Available | Positive | 2195685 - 2196890 | 46752.2 |
| aldose 1-epimerase | SAMN04490193_2146 | Not Available | Negative | 2196940 - 2198088 | 41484.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04490193_2147 | Not Available | Positive | 2198225 - 2198992 | 27129.7 |
| glutathione s-transferase | SAMN04490193_2149 | Not Available | Negative | 2199130 - 2199726 | 21926.6 |
| g/u mismatch-specific uracil-dna glycosylase | SAMN04490193_2150 | Not Available | Negative | 2199764 - 2200330 | 21194.5 |
| gst-like protein | SAMN04490193_2151 | Not Available | Positive | 2200356 - 2201192 | 30781.3 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04490193_2152 | Not Available | Negative | 2201240 - 2202166 | 33685.6 |
| hydroxypyruvate isomerase | SAMN04490193_2153 | Not Available | Negative | 2202186 - 2202965 | 27748.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Chlorosis | Causes | PMC12847849 |
| Internal stem discoloration | Causes | PMC12847849 |





